Ovine infinium hd snp beadchip
WebMay 18, 2024 · We combined the genotypes of Ovine Infinium HD (600K) SNP BeadChip in 2059 individuals from 67 populations all over the world, a large majority of which are from our research group Ren et al ... WebThe eight-sample BovineHD BeadChip, along with the proven Infinium HD Assay, presents a powerful high-throughput solution for whole-genome studies in cattle. Supporting …
Ovine infinium hd snp beadchip
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WebHigh Density (HD) SNP chip for Sheep. August 2012 ... extends the close working partnership between the ISGC and Illumina that underpinned the development and release … WebThe 54,241 SNPs on the OvineSNP50 BeadChip were subjected to rigorous functional testing on multiple breeds to ensure strong performance using the Infinium HD assay. …
WebAll SNP genotypes for Russian and Iranian sheep populations were generated by using the Ovine Infinium HD BeadChip (Illumina, San Diego, CA, USA) . To consider the accuracy of SNP genotyping, quality control was conducted by setting a cut-off of 0.5 for the GenCall and GenTrain scores [ 27 ] using PLINK v1.90 [ 28 ].
WebApr 30, 2024 · This data set contains chip data of five sheep breeds generated from Ovine Infinium HD SNP BeadChip. This data is plink format and includes two files, fiivesheep.ped and fivesheep.map. The breed name and sample number are Altay sheep (ALT; n=50), Large-tailed Han sheep (LTH; n=39), Hulun Buir sheep (HLB; n=146), Short-tailed grassland … WebSemantic Scholar profile for J. Yan, with 54 highly influential citations and 20 scientific research papers.
WebA GENOME-WIDE SCAN OF POSITIVE SELECTION SIGNATURE USING OVINE INFINIUM® HD SNP BEADCHIP IN TWO ROMNEY LINES, SELECTED FOR RESISTANCE OR RESILIENCE …
WebMay 20, 2024 · Copy number variations (CNVs) are a major source of structural variation in mammalian genomes. Here, we characterized the genome-wide CNV in 2059 sheep from … scooter repair greensboro ncWebOvine Infinium Hd Snp Beadchip, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 96/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more. stars, based on 1 article reviews. 9.99 to $1999.99. ovine infinium hd snp beadchip - by Bioz Stars , 2024-03. pre brush mouthwash studiesWebOvine Infinium® HD SNP BeadChip to increase SNP coverage. Data from the 222 HD geno-typed sheep were combined with the data from an additional 258 unique sheep to form a 480-sheep reference panel; this panel was used to impute the low-density genotypes to the HD genotyping density. Then, a genome-wide association analysis was conducted to iden- pre bridal photoshoots in bhubaneswarWebtraits in bighorn sheep using the Ovine Infinium R HD SNP BeadChip Joshua M. Miller1,3, Marco Festa-Bianchet2 and David W. Coltman1 1 Department of Biological Sciences, … preb shipping container homesWebMay 6, 2024 · Genotyping with Ovine Infinium ® HD SNP BeadChip. Using the same DNA, a subset of 222 sheep from the lower density dataset (Columbia N = 33, Polypay N = 80, Rambouillet N = 109) were genotyped again using the Ovine Infinium ® HD SNP BeadChip, which uses a set of 606,006 SNPs also designed by the International Sheep Genome … scooter repair in phoenixWebRussian sheep breeds traditionally raised in specific environments are valuable parts of sociocultural heritage and economic component of the regions. However, the import of commercial breeds negatively influences the population sizes of local sheep populations and might lead to biodiversity loss. Estimation of the runs of homozygosity (ROH) in local … scooter repair in clearwaterWebAug 5, 2024 · All the animals were genotyped using an Ovine Infinium HD SNP BeadChip which included 604,715 SNPs. Genotype quality control was executed using PLINK v1.90 . The following quality control criteria were used to filter the raw data: (1) locus call rate > 0.90; (2) minor allele frequency (MAF) > 0.01 and no evidence of Hardy Weinberg scooter repair long beach